IdeoViz
This is the development version of IdeoViz; for the stable release version, see IdeoViz.
Plots data (continuous/discrete) along chromosomal ideogram
Bioconductor version: Development (3.19)
Plots data associated with arbitrary genomic intervals along chromosomal ideogram.
Author: Shraddha Pai <shraddha.pai at utoronto.ca>, Jingliang Ren
Maintainer: Shraddha Pai <shraddha.pai at utoronto.ca>
Citation (from within R, enter
citation("IdeoViz")):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("IdeoViz")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | Microarray, Software, Visualization |
| Version | 1.39.1 |
| In Bioconductor since | BioC 3.0 (R-3.1) (9.5 years) |
| License | GPL-2 |
| Depends | Biobase, IRanges, GenomicRanges, RColorBrewer, rtracklayer, graphics, GenomeInfoDb |
| Imports | |
| System Requirements | |
| URL |
See More
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| Enhances | |
| Depends On Me | |
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| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | |
| Windows Binary | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/IdeoViz |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/IdeoViz |
| Package Short Url | https://bioconductor.org/packages/IdeoViz/ |
| Package Downloads Report | Download Stats |