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Informeasure

This is the development version of Informeasure; for the stable release version, see Informeasure.

R implementation of informtion measures


Bioconductor version: Development (3.19)

This package consolidates a comprehensive set of information measurements, encompassing mutual information, conditional mutual information, interaction information, partial information decomposition, and part mutual information.

Author: Chu Pan [aut, cre]

Maintainer: Chu Pan <chu.pan at hnu.edu.cn>

Citation (from within R, enter citation("Informeasure")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("Informeasure")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Informeasure")
Informeasure: a tool to quantify nonlinear dependence between variables in biological regulatory networks from an information theory perspective HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews GeneExpression, Network, NetworkInference, Software
Version 1.13.1
In Bioconductor since BioC 3.12 (R-4.0) (3.5 years)
License Artistic-2.0
Depends R (>= 4.0)
Imports entropy
System Requirements
URL https://github.com/chupan1218/Informeasure
Bug Reports https://github.com/chupan1218/Informeasure/issues
See More
Suggests knitr, BiocStyle, rmarkdown, testthat (>= 3.0.0), SummarizedExperiment
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Informeasure_1.13.1.tar.gz
Windows Binary Informeasure_1.13.1.zip (64-bit only)
macOS Binary (x86_64) Informeasure_1.13.1.tgz
macOS Binary (arm64) Informeasure_1.13.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/Informeasure
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Informeasure
Bioc Package Browser https://code.bioconductor.org/browse/Informeasure/
Package Short Url https://bioconductor.org/packages/Informeasure/
Package Downloads Report Download Stats