chopsticks
This is the development version of chopsticks; for the stable release version, see chopsticks.
The 'snp.matrix' and 'X.snp.matrix' Classes
Bioconductor version: Development (3.21)
Implements classes and methods for large-scale SNP association studies
Author: Hin-Tak Leung <htl10 at users.sourceforge.net>
Maintainer: Hin-Tak Leung <htl10 at users.sourceforge.net>
Citation (from within R, enter
citation("chopsticks")
):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("chopsticks")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("chopsticks")
snpMatrix | R Script | |
Reference Manual |
Details
biocViews | GeneticVariability, Microarray, SNP, SNPsAndGeneticVariability, Software |
Version | 1.73.0 |
In Bioconductor since | BioC 2.8 (R-2.13) (13.5 years) |
License | GPL-3 |
Depends | |
Imports | graphics, stats, utils, methods, survival |
System Requirements | |
URL | http://outmodedbonsai.sourceforge.net/ |
See More
Suggests | hexbin |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | chopsticks_1.73.0.tar.gz |
Windows Binary (x86_64) | chopsticks_1.73.0.zip (64-bit only) |
macOS Binary (x86_64) | |
macOS Binary (arm64) | |
Source Repository | git clone https://git.bioconductor.org/packages/chopsticks |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/chopsticks |
Bioc Package Browser | https://code.bioconductor.org/browse/chopsticks/ |
Package Short Url | https://bioconductor.org/packages/chopsticks/ |
Package Downloads Report | Download Stats |