evaluomeR

DOI: 10.18129/B9.bioc.evaluomeR    

This is the development version of evaluomeR; to use it, please install the devel version of Bioconductor.

Evaluation of Bioinformatics Metrics

Bioconductor version: Development (3.10)

Evaluating the reliability of your own metrics and the measurements done on your own datasets by analysing the stability and goodness of the classifications of such metrics.

Author: José Antonio Bernabé-Díaz [aut, cre], Manuel Franco [aut], Juana-María Vivo [aut], Manuel Quesada-Martínez [aut], Astrid Duque-Ramos [aut], Jesualdo Tomás Fernández-Breis [aut]

Maintainer: José Antonio Bernabé-Díaz <joseantonio.bernabe1 at um.es>

Citation (from within R, enter citation("evaluomeR")):

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("evaluomeR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("evaluomeR")

 

HTML R Script Evaluation of Bioinformatics Metrics with evaluomeR
PDF   Reference Manual
Text   NEWS
Text   LICENSE

Details

biocViews Classification, Clustering, FeatureExtraction, Software
Version 1.1.1
In Bioconductor since BioC 3.9 (R-3.6) (< 6 months)
License GPL-3
Depends R (>= 3.6), SummarizedExperiment, MultiAssayExperiment
Imports cluster (>= 2.0.7-1), corrplot (>= 0.84), grDevices, graphics, stats, Rdpack
LinkingTo
Suggests BiocStyle, knitr, rmarkdown, kableExtra, magrittr
SystemRequirements
Enhances
URL http://sele.inf.um.es/evaluome/index.html
BugReports https://github.com/neobernad/evaluomeR/issues
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package evaluomeR_1.1.1.tar.gz
Windows Binary evaluomeR_1.1.1.zip
Mac OS X 10.11 (El Capitan) evaluomeR_1.1.1.tgz
Source Repository git clone https://git.bioconductor.org/packages/evaluomeR
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/evaluomeR
Package Short Url https://bioconductor.org/packages/evaluomeR/
Package Downloads Report Download Stats

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