The search feature on this website is currently unavailable.
To use google search type site: "search term" in browser.


This is the development version of iCheck; for the stable release version, see iCheck.

QC Pipeline and Data Analysis Tools for High-Dimensional Illumina mRNA Expression Data

Bioconductor version: Development (3.19)

QC pipeline and data analysis tools for high-dimensional Illumina mRNA expression data.

Author: Weiliang Qiu [aut, cre], Brandon Guo [aut, ctb], Christopher Anderson [aut, ctb], Barbara Klanderman [aut, ctb], Vincent Carey [aut, ctb], Benjamin Raby [aut, ctb]

Maintainer: Weiliang Qiu <stwxq at>

Citation (from within R, enter citation("iCheck")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

iCheck PDF R Script
Reference Manual PDF


biocViews DNAMethylation, DifferentialExpression, GeneExpression, Microarray, OneChannel, Preprocessing, QualityControl, Software, TwoChannel
Version 1.33.0
In Bioconductor since BioC 3.2 (R-3.2) (8.5 years)
License GPL (>= 2)
Depends R (>= 3.2.0), Biobase, lumi, gplots
Imports stats, graphics, preprocessCore, grDevices, randomForest, affy, limma, parallel, GeneSelectMMD, rgl, MASS, lmtest, scatterplot3d, utils
System Requirements
See More
Linking To
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package iCheck_1.33.0.tar.gz
Windows Binary
macOS Binary (x86_64) iCheck_1.33.0.tgz
macOS Binary (arm64)
Source Repository git clone
Source Repository (Developer Access) git clone
Bioc Package Browser
Package Short Url
Package Downloads Report Download Stats