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stepNorm

This is the development version of stepNorm; for the stable release version, see stepNorm.

Stepwise normalization functions for cDNA microarrays


Bioconductor version: Development (3.19)

Stepwise normalization functions for cDNA microarray data.

Author: Yuanyuan Xiao <yxiao at itsa.ucsf.edu>, Yee Hwa (Jean) Yang <jean at biostat.ucsf.edu>

Maintainer: Yuanyuan Xiao <yxiao at itsa.ucsf.edu>

Citation (from within R, enter citation("stepNorm")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("stepNorm")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews Microarray, Preprocessing, Software, TwoChannel
Version 1.75.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 19 years)
License LGPL
Depends R (>= 1.8.0), marray, methods
Imports marray, MASS, methods, stats
System Requirements
URL http://www.biostat.ucsf.edu/jean/
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package stepNorm_1.75.0.tar.gz
Windows Binary stepNorm_1.75.0.zip
macOS Binary (x86_64) stepNorm_1.75.0.tgz
macOS Binary (arm64) stepNorm_1.75.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/stepNorm
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/stepNorm
Bioc Package Browser https://code.bioconductor.org/browse/stepNorm/
Package Short Url https://bioconductor.org/packages/stepNorm/
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