CHANGES IN VERSION 0.99.8 ------------------------- SUBMIT TO BIOCONDUCTOR FOR REVIEW o Corrected warnings and errors CHANGES IN VERSION 0.99.9 ------------------------- o Made most required changes from review CHANGES IN VERSION 0.99.10 -------------------------- o Made additional required changes from review CHANGES IN VERSION 0.99.11 -------------------------- o fix a bug in plot_coverage function and make changes in color scheme. CHANGES IN VERSION 0.99.12 -------------------------- o version bump. CHANGES IN VERSION 0.99.13 -------------------------- o bug fix and version bump. CHANGES IN VERSION 1.3.4 -------------------------- o plot_coverage function has an option "samples" added to allow user to visualize a subset of samples. o fix a bug caused by NA values threshold for rho(<0.1) for scaling factor before degnorm core codes CHANGES IN VERSION 1.7.1 -------------------------- o .gtf_parse function has been updated so overlapping exons are merged in total transcript