Welcome to the new bioconductor.org!

BeadArrayUseCases

This is the development version of BeadArrayUseCases; for the stable release version, see BeadArrayUseCases.

Analysing Illumina BeadArray expression data using Bioconductor


Bioconductor version: Development (3.19)

Example data files and use cases for processing Illumina BeadArray expression data using Bioconductor

Author: Mark Dunning, Wei Shi, Andy Lynch, Mike Smith, Matt Ritchie

Maintainer: Mike Smith <grimbough at gmail.com>

Citation (from within R, enter citation("BeadArrayUseCases")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("BeadArrayUseCases")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BeadArrayUseCases")
BeadArrayUseCases.pdf PDF R Script
Reference Manual PDF

Details

biocViews ExperimentData, MicroarrayData
Version 1.41.0
License GPL-2
Depends
Imports beadarray(>= 2.3.18), limma, GEOquery
System Requirements
URL
See More
Suggests Biostrings, GenomicRanges, illuminaHumanv1.db, illuminaHumanv2.db, illuminaHumanv3.db
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BeadArrayUseCases_1.41.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/BeadArrayUseCases
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/BeadArrayUseCases
Package Short Url https://bioconductor.org/packages/BeadArrayUseCases/
Package Downloads Report Download Stats