DmelSGI
This is the development version of DmelSGI; for the stable release version, see DmelSGI.
Experimental data and documented source code for the paper "A Map of Directional Genetic Interactions in a Metazoan Cell"
Bioconductor version: Development (3.20)
The package contains the experimental data and documented source code of the manuscript "Fischer et al., A Map of Directional Genetic Interactions in a Metazoan Cell, eLife, 2015, in Press.". The vignette code generates all figures in the paper.
Author: Bernd Fischer [aut], Wolfgang Huber [ctb], Mike Smith [cre]
Maintainer: Mike Smith <mike.smith at embl.de>
citation("DmelSGI")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("DmelSGI")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("DmelSGI")
DmelSGI | R Script | |
Reference Manual | ||
NEWS | Text |
Details
biocViews | CellCulture, Drosophila_melanogaster_Data, ExperimentData, HighThroughputImagingData, HighthroughputImagingData, MicrotitrePlateAssayData, ReproducibleResearch |
Version | 1.37.0 |
License | Artistic-2.0 |
Depends | R (>= 3.0) |
Imports | grid, TSP, limma, rhdf5, knitr, abind, gplots, igraph, grDevices, graphics, stats |
System Requirements | |
URL |
See More
Suggests | BiocStyle, EBImage, RColorBrewer, RNAinteractMAPK, hwriter, xtable, beeswarm |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | FeatSeekR |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | DmelSGI_1.37.0.tar.gz |
Windows Binary | |
macOS Binary (x86_64) | |
macOS Binary (arm64) | |
Source Repository | git clone https://git.bioconductor.org/packages/DmelSGI |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/DmelSGI |
Package Short Url | https://bioconductor.org/packages/DmelSGI/ |
Package Downloads Report | Download Stats |