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ObMiTi

This is the development version of ObMiTi; for the stable release version, see ObMiTi.

Ob/ob Mice Data on Normal and High Fat Diet


Bioconductor version: Development (3.20)

The package provide RNA-seq count for 2 strains of mus musclus; Wild type and Ob/Ob. Each strain was divided into two groups, and each group received either chow diet or high fat diet. RNA expression was measured after 20 weeks in 7 tissues.

Author: Omar Elashkar [aut, cre] , Mahmoud Ahmed [aut]

Maintainer: Omar Elashkar <omar.i.elashkar at gmail.com>

Citation (from within R, enter citation("ObMiTi")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("ObMiTi")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ObMiTi")
Using ObMiTi HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews ExperimentData, ExperimentHub, GEO, RNASeqData
Version 1.13.0
License GPL-3
Depends R (>= 4.1), SummarizedExperiment, ExperimentHub
Imports
System Requirements
URL https://github.com/OmarElAshkar/ObMiTi
Bug Reports https://github.com/OmarElAshkar/ObMiTi/issues
See More
Suggests knitr, rmarkdown, BiocManager, GenomicFeatures, S4Vectors, devtools, testthat
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ObMiTi_1.13.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/ObMiTi
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ObMiTi
Package Short Url https://bioconductor.org/packages/ObMiTi/
Package Downloads Report Download Stats