CONFESS

DOI: 10.18129/B9.bioc.CONFESS    

Cell OrderiNg by FluorEScence Signal

Bioconductor version: Release (3.7)

Single Cell Fluidigm Spot Detector.

Author: Diana LOW and Efthimios MOTAKIS

Maintainer: Diana LOW <dlow at imcb.a-star.edu.sg>

Citation (from within R, enter citation("CONFESS")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("CONFESS")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("CONFESS")

 

PDF R Script CONFESS
HTML R Script CONFESS
PDF   Reference Manual
Text   NEWS

Details

biocViews CellBiology, Classification, Clustering, DataImport, GeneExpression, QualityControl, RNASeq, Regression, Software, TimeCourse, Visualization
Version 1.8.0
In Bioconductor since BioC 3.3 (R-3.3) (2.5 years)
License GPL-2
Depends R (>= 3.3), grDevices, utils, stats, graphics
Imports methods, changepoint, cluster, contrast, data.table (>= 1.9.7), ecp, EBImage, flexmix, flowCore, flowClust, flowMeans, flowMerge, flowPeaks, foreach, ggplot2, grid, limma, MASS, moments, outliers, parallel, plotrix, raster, readbitmap, reshape2, SamSPECTRAL, waveslim, wavethresh, zoo
LinkingTo
Suggests BiocStyle, knitr, rmarkdown, CONFESSdata
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package CONFESS_1.8.0.tar.gz
Windows Binary CONFESS_1.8.0.zip
Mac OS X 10.11 (El Capitan) CONFESS_1.8.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/CONFESS
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/CONFESS
Package Short Url http://bioconductor.org/packages/CONFESS/
Package Downloads Report Download Stats

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