Welcome to the new bioconductor.org!


Tools for HELP data analysis

Bioconductor version: Release (3.18)

The package contains a modular pipeline for analysis of HELP microarray data, and includes graphical and mathematical tools with more general applications.

Author: Reid F. Thompson <reid.thompson at gmail.com>, John M. Greally <john.greally at einstein.yu.edu>, with contributions from Mark Reimers <mreimers at vcu.edu>

Maintainer: Reid F. Thompson <reid.thompson at gmail.com>

Citation (from within R, enter citation("HELP")):


To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

1. Primer PDF R Script
Reference Manual PDF


biocViews CpGIsland, DNAMethylation, DataImport, Microarray, Preprocessing, QualityControl, Software, TwoChannel, Visualization
Version 1.60.0
In Bioconductor since BioC 2.3 (R-2.8) (15.5 years)
License GPL (>= 2)
Depends R (>= 2.8.0), stats, graphics, grDevices, Biobase, methods
System Requirements
See More
Linking To
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package HELP_1.60.0.tar.gz
Windows Binary HELP_1.60.0.zip
macOS Binary (x86_64) HELP_1.60.0.tgz
macOS Binary (arm64) HELP_1.60.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/HELP
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/HELP
Bioc Package Browser https://code.bioconductor.org/browse/HELP/
Package Short Url https://bioconductor.org/packages/HELP/
Package Downloads Report Download Stats