MEAT
Muscle Epigenetic Age Test
Bioconductor version: Release (3.19)
This package estimates epigenetic age in skeletal muscle, using DNA methylation data generated with the Illumina Infinium technology (HM27, HM450 and HMEPIC).
Author: Sarah Voisin [aut, cre] , Steve Horvath [ctb]
Maintainer: Sarah Voisin <sarah.voisin.aeris at gmail.com>
Citation (from within R, enter
citation("MEAT")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("MEAT")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("MEAT")
MEAT | HTML | R Script |
Reference Manual | ||
LICENSE | Text |
Details
biocViews | BiomedicalInformatics, DNAMethylation, Epigenetics, MethylationArray, Microarray, Normalization, Preprocessing, Software |
Version | 1.16.0 |
In Bioconductor since | BioC 3.11 (R-4.0) (4.5 years) |
License | MIT + file LICENSE |
Depends | R (>= 4.0) |
Imports | impute(>= 1.58), dynamicTreeCut (>= 1.63), glmnet (>= 2.0), grDevices, graphics, stats, utils, stringr, tibble, RPMM (>= 1.25), minfi(>= 1.30), dplyr, SummarizedExperiment, wateRmelon |
System Requirements | |
URL | https://github.com/sarah-voisin/MEAT |
Bug Reports | https://github.com/sarah-voisin/MEAT/issues |
See More
Suggests | knitr, markdown, rmarkdown, BiocStyle, testthat (>= 2.1.0) |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | MEAT_1.16.0.tar.gz |
Windows Binary | MEAT_1.16.0.zip |
macOS Binary (x86_64) | MEAT_1.16.0.tgz |
macOS Binary (arm64) | MEAT_1.16.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/MEAT |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/MEAT |
Bioc Package Browser | https://code.bioconductor.org/browse/MEAT/ |
Package Short Url | https://bioconductor.org/packages/MEAT/ |
Package Downloads Report | Download Stats |