MSstatsQC

DOI: 10.18129/B9.bioc.MSstatsQC    

Longitudinal system suitability monitoring and quality control for proteomic experiments

Bioconductor version: Release (3.8)

MSstatsQC is an R package which provides longitudinal system suitability monitoring and quality control tools for proteomic experiments.

Author: Eralp Dogu [aut, cre], Sara Taheri [aut], Olga Vitek [aut]

Maintainer: Eralp Dogu <eralp.dogu at gmail.com>

Citation (from within R, enter citation("MSstatsQC")):

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("MSstatsQC", version = "3.8")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MSstatsQC")

 

HTML R Script MSstatsQC
PDF   Reference Manual
Text   NEWS

Details

biocViews MassSpectrometry, Proteomics, QualityControl, Software
Version 2.0.0
License Artistic License 2.0
Depends
Imports dplyr, plotly, RecordLinkage, ggplot2, ggExtra, stats, grid, MSnbase, qcmetrics
LinkingTo
Suggests knitr, rmarkdown, testthat, RforProteomics
SystemRequirements
Enhances
URL http://msstats.org/msstatsqc
BugReports https://groups.google.com/forum/#!forum/msstatsqc
Depends On Me
Imports Me MSstatsQCgui
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MSstatsQC_2.0.0.tar.gz
Windows Binary MSstatsQC_2.0.0.zip
Mac OS X 10.11 (El Capitan) MSstatsQC_2.0.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/MSstatsQC
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/MSstatsQC
Package Short Url http://bioconductor.org/packages/MSstatsQC/
Package Downloads Report Download Stats

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