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Classification by local similarity threshold

Bioconductor version: Release (3.18)

Package for modified nearest-neighbor classification based on calculation of a similarity threshold distinguishing within-group from between-group comparisons.

Author: Noah Hoffman

Maintainer: Noah Hoffman <ngh2 at uw.edu>

Citation (from within R, enter citation("clst")):


To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

clst PDF R Script
Reference Manual PDF


biocViews Classification, Software
Version 1.50.0
In Bioconductor since BioC 2.8 (R-2.13) (13 years)
License GPL-3
Depends R (>= 2.10)
Imports ROC, lattice
System Requirements
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Suggests RUnit
Linking To
Depends On Me clstutils
Imports Me
Suggests Me
Links To Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package clst_1.50.0.tar.gz
Windows Binary clst_1.50.0.zip
macOS Binary (x86_64) clst_1.50.0.tgz
macOS Binary (arm64) clst_1.50.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/clst
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/clst
Bioc Package Browser https://code.bioconductor.org/browse/clst/
Package Short Url https://bioconductor.org/packages/clst/
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