maser

DOI: 10.18129/B9.bioc.maser    

Mapping Alternative Splicing Events to pRoteins

Bioconductor version: Release (3.8)

This package provides functionalities for analysis, annotation and visualizaton of alternative splicing events.

Author: Diogo Veiga [aut, cre]

Maintainer: Diogo Veiga <diogof.veiga at gmail.com>

Citation (from within R, enter citation("maser")):

Installation

To install this package, start R and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("maser", version = "3.8")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("maser")

 

HTML R Script Introduction
HTML R Script Mapping protein features to splicing events
PDF   Reference Manual
Text   NEWS
Text   LICENSE

Details

biocViews AlternativeSplicing, Software, Transcriptomics, Visualization
Version 1.0.0
License MIT + file LICENSE
Depends R (>= 3.5.0), ggplot2, GenomicRanges
Imports dplyr, rtracklayer, reshape2, Gviz, DT, GenomeInfoDb, stats, utils, IRanges, methods, BiocGenerics, parallel, data.table
LinkingTo
Suggests testthat, knitr, rmarkdown, BiocStyle, AnnotationHub
SystemRequirements
Enhances
URL https://github.com/DiogoVeiga/maser
BugReports https://github.com/DiogoVeiga/maser/issues
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package maser_1.0.0.tar.gz
Windows Binary maser_1.0.0.zip
Mac OS X 10.11 (El Capitan) maser_1.0.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/maser
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/maser
Package Short Url http://bioconductor.org/packages/maser/
Package Downloads Report Download Stats

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