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profileScoreDist

Profile score distributions


Bioconductor version: Release (3.18)

Regularization and score distributions for position count matrices.

Author: Paal O. Westermark

Maintainer: Paal O. Westermark <pal-olof.westermark at charite.de>

Citation (from within R, enter citation("profileScoreDist")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("profileScoreDist")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("profileScoreDist")
Using profileScoreDist PDF R Script
Reference Manual PDF
NEWS Text
LICENSE Text

Details

biocViews GeneRegulation, Software, StatisticalMethod
Version 1.30.0
In Bioconductor since BioC 3.3 (R-3.3) (8 years)
License MIT + file LICENSE
Depends R (>= 3.3)
Imports Rcpp, BiocGenerics, methods, graphics
System Requirements
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Suggests BiocStyle, knitr, MotifDb
Linking To Rcpp
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package profileScoreDist_1.30.0.tar.gz
Windows Binary profileScoreDist_1.30.0.zip (64-bit only)
macOS Binary (x86_64) profileScoreDist_1.30.0.tgz
macOS Binary (arm64) profileScoreDist_1.30.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/profileScoreDist
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/profileScoreDist
Bioc Package Browser https://code.bioconductor.org/browse/profileScoreDist/
Package Short Url https://bioconductor.org/packages/profileScoreDist/
Package Downloads Report Download Stats