rexposome

DOI: 10.18129/B9.bioc.rexposome    

Exposome exploration and outcome data analysis

Bioconductor version: Release (3.8)

Package that allows to explore the exposome and to perform association analyses between exposures and health outcomes.

Author: Carles Hernandez-Ferrer [aut, cre], Juan R. Gonzalez [aut]

Maintainer: Carles Hernandez-Ferrer <carles.hernandez at isglobal.org>

Citation (from within R, enter citation("rexposome")):

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("rexposome", version = "3.8")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("rexposome")

 

HTML R Script Dealing with Multiple Imputations
HTML R Script Exposome Data Analysis
PDF   Reference Manual
Text   LICENSE

Details

biocViews BiologicalQuestion, BiomedicalInformatics, Classification, Clustering, DataImport, DataRepresentation, ExperimentalDesign, Infrastructure, MultipleComparison, Software
Version 1.4.0
License MIT + file LICENSE
Depends R (>= 3.5), Biobase
Imports methods, utils, stats, lsr, FactoMineR, stringr, circlize, corrplot, ggplot2, reshape2, pryr, S4Vectors, imputeLCMD, scatterplot3d, glmnet, gridExtra, grid, Hmisc, gplots, gtools, scales, lme4, grDevices, graphics, ggrepel, mice
LinkingTo
Suggests mclust, flexmix, testthat, BiocStyle, knitr, rmarkdown
SystemRequirements
Enhances
URL
Depends On Me
Imports Me omicRexposome
Suggests Me brgedata
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package rexposome_1.4.0.tar.gz
Windows Binary rexposome_1.4.0.zip
Mac OS X 10.11 (El Capitan) rexposome_1.4.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/rexposome
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/rexposome
Package Short Url http://bioconductor.org/packages/rexposome/
Package Downloads Report Download Stats

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