DOI: 10.18129/B9.bioc.rpx    

R Interface to the ProteomeXchange Repository

Bioconductor version: Release (3.13)

The rpx package implements an interface to proteomics data submitted to the ProteomeXchange consortium.

Author: Laurent Gatto

Maintainer: Laurent Gatto <laurent.gatto at uclouvain.be>

Citation (from within R, enter citation("rpx")):


To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


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HTML R Script An R interface to the ProteomeXchange repository
PDF   Reference Manual
Text   NEWS


biocViews DataImport, ImmunoOncology, MassSpectrometry, Proteomics, Software, ThirdPartyClient
Version 2.0.3
In Bioconductor since BioC 2.14 (R-3.1) (7.5 years)
License GPL-2
Depends methods
Imports BiocFileCache, jsonlite, xml2, RCurl, utils
Suggests Biostrings, BiocStyle, testthat, knitr, rmarkdown
URL https://github.com/lgatto/rpx
BugReports https://github.com/lgatto/rpx/issues
Depends On Me proteomics
Imports Me MBQN
Suggests Me MSnbase, RforProteomics
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package rpx_2.0.3.tar.gz
Windows Binary rpx_2.0.3.zip
macOS 10.13 (High Sierra) rpx_2.0.3.tgz
Source Repository git clone https://git.bioconductor.org/packages/rpx
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/rpx
Package Short Url https://bioconductor.org/packages/rpx/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.13 Source Archive

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