0.1 Overview

VERSO is an algorithmic framework that processes variants profiles from viral samples, to produce phylogenetic models of viral evolution from clonal variants and to subsequently quantify the intra-host genomic diversity of samples. VERSO includes two separate and subsequent steps; in this repository we provide an R implementation of VERSO STEP 1.

0.2 Installing VERSO

The R version of VERSO can be installed from Bioconductor. To do so, we need to install the R packages VERSO depends on and the devtools package.

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("VERSO")

0.3 Debug

Please feel free to contact us if you have problems running our tool at or .