WeberDivechaLCdata
Spatially-resolved transcriptomics and single-nucleus RNA-sequencing data from the locus coeruleus (LC) in postmortem human brain samples
Bioconductor version: Release (3.19)
Spatially-resolved transcriptomics (SRT) and single-nucleus RNA-sequencing (snRNA-seq) data from the locus coeruleus (LC) in postmortem human brain samples. Data were generated with the 10x Genomics Visium SRT and 10x Genomics Chromium snRNA-seq platforms. Datasets are stored in SpatialExperiment and SingleCellExperiment formats.
Author: Lukas M. Weber [aut, cre] , Heena R. Divecha [aut]
Maintainer: Lukas M. Weber <lmweberedu at gmail.com>
citation("WeberDivechaLCdata")
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Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("WeberDivechaLCdata")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("WeberDivechaLCdata")
WeberDivechaLCdata package | HTML | R Script |
Reference Manual | ||
NEWS | Text | |
LICENSE | Text |
Details
biocViews | ExperimentData, ExperimentHub, ExpressionData, Homo_sapiens_Data, RNASeqData, ReproducibleResearch, SequencingData, SingleCellData, SpatialData |
Version | 1.6.0 |
License | MIT + file LICENSE |
Depends | ExperimentHub, SpatialExperiment, SingleCellExperiment |
Imports | utils |
System Requirements | |
URL | https://github.com/lmweber/WeberDivechaLCdata |
Bug Reports | https://github.com/lmweber/WeberDivechaLCdata/issues |
See More
Suggests | BiocStyle, knitr, rmarkdown |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | nnSVG |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | WeberDivechaLCdata_1.6.0.tar.gz |
Windows Binary | |
macOS Binary (x86_64) | |
macOS Binary (arm64) | |
Source Repository | git clone https://git.bioconductor.org/packages/WeberDivechaLCdata |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/WeberDivechaLCdata |
Package Short Url | https://bioconductor.org/packages/WeberDivechaLCdata/ |
Package Downloads Report | Download Stats |