AnVILGCP
This is the development version of AnVILGCP; for the stable release version, see AnVILGCP.
The GCP R Client for the AnVIL
Bioconductor version: Development (3.22)
The package provides a set of functions to interact with the Google Cloud Platform (GCP) services on the AnVIL platform. The package is designed to use the API calls from the AnVIL package. It coordinates AnVIL workspace functionality with native GCP tools.
Author: Marcel Ramos [aut, cre]
, Nitesh Turaga [aut], Martin Morgan [aut]
Maintainer: Marcel Ramos <marcel.ramos at sph.cuny.edu>
citation("AnVILGCP")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("AnVILGCP")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("AnVILGCP")| Working with AnVIL on GCP | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | DataImport, Infrastructure, Software, ThirdPartyClient |
| Version | 1.3.2 |
| In Bioconductor since | BioC 3.20 (R-4.4) (0.5 years) |
| License | Artistic-2.0 |
| Depends | R (>= 4.5.0) |
| Imports | AnVILBase, BiocBaseUtils, dplyr, httr, jsonlite, methods, rlang, stats, tibble, tidyr, utils |
| System Requirements | gsutil, gcloud |
| URL | https://github.com/Bioconductor/AnVILGCP |
| Bug Reports | https://github.com/Bioconductor/AnVILGCP/issues |
See More
| Suggests | AnVIL, BiocStyle, knitr, rmarkdown, testthat, withr |
| Linking To | |
| Enhances | |
| Depends On Me | AnVILWorkflow, terraTCGAdata |
| Imports Me | AnVILPublish |
| Suggests Me | AnVIL, AnVILBase |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | AnVILGCP_1.3.2.tar.gz |
| Windows Binary (x86_64) | AnVILGCP_1.3.2.zip |
| macOS Binary (x86_64) | AnVILGCP_1.3.2.tgz |
| macOS Binary (arm64) | AnVILGCP_1.3.2.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/AnVILGCP |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/AnVILGCP |
| Bioc Package Browser | https://code.bioconductor.org/browse/AnVILGCP/ |
| Package Short Url | https://bioconductor.org/packages/AnVILGCP/ |
| Package Downloads Report | Download Stats |