Welcome to the new bioconductor.org!

erma

This is the development version of erma; for the stable release version, see erma.

epigenomic road map adventures


Bioconductor version: Development (3.19)

Software and data to support epigenomic road map adventures.

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("erma")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("erma")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("erma")
ermaInteractive HTML R Script
Reference Manual PDF

Details

biocViews Software
Version 1.19.0
In Bioconductor since BioC 3.2 (R-3.2) (8.5 years)
License Artistic-2.0
Depends R (>= 3.1), methods, Homo.sapiens, GenomicFiles(>= 1.5.2)
Imports rtracklayer(>= 1.38.1), S4Vectors(>= 0.23.18), BiocGenerics, GenomicRanges, SummarizedExperiment, ggplot2, GenomeInfoDb, Biobase, shiny, BiocParallel, IRanges, AnnotationDbi
System Requirements
URL
See More
Suggests rmarkdown, BiocStyle, knitr, GO.db, png, DT, doParallel
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package erma_1.19.0.tar.gz
Windows Binary erma_1.19.0.zip
macOS Binary (x86_64) erma_1.19.0.tgz
macOS Binary (arm64) erma_1.19.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/erma
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/erma
Bioc Package Browser https://code.bioconductor.org/browse/erma/
Package Short Url https://bioconductor.org/packages/erma/
Package Downloads Report Download Stats