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iSEEhex

This is the development version of iSEEhex; for the stable release version, see iSEEhex.

iSEE extension for summarising data points in hexagonal bins


Bioconductor version: Development (3.19)

This package provides panels summarising data points in hexagonal bins for `iSEE`. It is part of `iSEEu`, the iSEE universe of panels that extend the `iSEE` package.

Author: Kevin Rue-Albrecht [aut, cre] , Charlotte Soneson [aut] , Federico Marini [aut] , Aaron Lun [aut]

Maintainer: Kevin Rue-Albrecht <kevinrue67 at gmail.com>

Citation (from within R, enter citation("iSEEhex")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("iSEEhex")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("iSEEhex")
Panel universe HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews Infrastructure, Software
Version 1.5.0
In Bioconductor since BioC 3.16 (R-4.2) (1.5 years)
License Artistic-2.0
Depends SummarizedExperiment, iSEE
Imports ggplot2, hexbin, methods, shiny
System Requirements
URL https://github.com/iSEE/iSEEhex
Bug Reports https://support.bioconductor.org/t/iSEEhex
See More
Suggests BiocStyle, covr, knitr, RefManageR, rmarkdown, sessioninfo, testthat (>= 3.0.0), scRNAseq, scater
Linking To
Enhances
Depends On Me iSEEu
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package iSEEhex_1.5.0.tar.gz
Windows Binary iSEEhex_1.5.0.zip (64-bit only)
macOS Binary (x86_64) iSEEhex_1.5.0.tgz
macOS Binary (arm64) iSEEhex_1.5.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/iSEEhex
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/iSEEhex
Bioc Package Browser https://code.bioconductor.org/browse/iSEEhex/
Package Short Url https://bioconductor.org/packages/iSEEhex/
Package Downloads Report Download Stats