To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("pathRender")

In most cases, you don't need to download the package archive at all.

pathRender

 

   

This is the development version of pathRender; for the stable release version, see pathRender.

Render molecular pathways

Bioconductor version: Development (3.4)

build graphs from pathway databases, render them by Rgraphviz.

Author: Li Long <lilong at isb-sib.ch>

Maintainer: Vince Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("pathRender")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("pathRender")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("pathRender")

 

PDF pathRender overview
PDF pathway graphs colored by expression map
PDF   Reference Manual

Details

biocViews GraphAndNetwork, Pathways, Software, Visualization
Version 1.41.0
In Bioconductor since BioC 1.8 (R-2.3) (10.5 years)
License LGPL
Depends graph, Rgraphviz, RColorBrewer, cMAP, AnnotationDbi, methods, stats4
Imports
LinkingTo
Suggests ALL, hgu95av2.db
SystemRequirements
Enhances
URL http://www.bioconductor.org
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source pathRender_1.41.0.tar.gz
Windows Binary pathRender_1.41.0.zip
Mac OS X 10.9 (Mavericks) pathRender_1.41.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/pathRender
Package Short Url http://bioconductor.org/packages/pathRender/
Package Downloads Report Download Stats

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