To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BSgenome.Hsapiens.UCSC.hg19")

In most cases, you don't need to download the package archive at all.

BSgenome.Hsapiens.UCSC.hg19

This package is for version 2.10 of Bioconductor; for the stable, up-to-date release version, see BSgenome.Hsapiens.UCSC.hg19.

Homo sapiens (Human) full genome (UCSC version hg19)

Bioconductor version: 2.10

Homo sapiens (Human) full genome as provided by UCSC (hg19, Feb. 2009) and stored in Biostrings objects.

Author: H. Pages

Maintainer: Biocore Team c/o BioC user list <bioconductor at stat.math.ethz.ch>

Citation (from within R, enter citation("BSgenome.Hsapiens.UCSC.hg19")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BSgenome.Hsapiens.UCSC.hg19")


PDF		Reference Manual

biocViews	AnnotationData, Genetics, Homo_sapiens
Version	1.3.17
License	Artistic-2.0
Depends	BSgenome(>= 1.19.2)
Imports	BSgenome
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me	biovizBase, BSgenome, ggbio, MEDIPS, oneChannelGUI, R453Plus1Toolbox, rtracklayer, SNPlocs.Hsapiens.dbSNP.20100427, SNPlocs.Hsapiens.dbSNP.20101109, SNPlocs.Hsapiens.dbSNP.20110815, SNPlocs.Hsapiens.dbSNP.20111119, VariantAnnotation

Follow Installation instructions to use this package in your R session.

Package Source	BSgenome.Hsapiens.UCSC.hg19_1.3.17.tar.gz
Windows Binary	BSgenome.Hsapiens.UCSC.hg19_1.3.17.zip
Mac OS X 10.6 (Snow Leopard)
Package Short Url	http://bioconductor.org/packages/BSgenome.Hsapiens.UCSC.hg19/
Package Downloads Report	Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Please read the posting guide. Post questions about Bioconductor to one of the following locations: