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interactiveDisplay

This is the development version of interactiveDisplay; for the stable release version, see interactiveDisplay.

Package for enabling powerful shiny web displays of Bioconductor objects


Bioconductor version: Development (3.19)

The interactiveDisplay package contains the methods needed to generate interactive Shiny based display methods for Bioconductor objects.

Author: Bioconductor Package Maintainer [cre], Shawn Balcome [aut], Marc Carlson [ctb]

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("interactiveDisplay")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("interactiveDisplay")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("interactiveDisplay")
interactiveDisplay: A package for enabling interactive visualization of Bioconductor objects PDF R Script
Reference Manual PDF

Details

biocViews AnnotationData, Classification, DataRepresentation, GO, GUI, GeneExpression, Genetics, Microarray, Network, QualityControl, Sequencing, ShinyApps, Software, Visualization
Version 1.41.0
In Bioconductor since BioC 2.13 (R-3.0) (10.5 years)
License Artistic-2.0
Depends R (>= 3.5.0), methods, BiocGenerics, grid
Imports interactiveDisplayBase(>= 1.7.3), shiny, RColorBrewer, ggplot2, reshape2, plyr, gridSVG, XML, Category, AnnotationDbi
System Requirements
URL
See More
Suggests RUnit, hgu95av2.db, knitr, GenomicRanges, SummarizedExperiment, GOstats, ggbio, GO.db, Gviz, rtracklayer, metagenomeSeq, gplots, vegan, Biobase
Linking To
Enhances rstudio
Depends On Me
Imports Me
Suggests Me metagenomeSeq
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package interactiveDisplay_1.41.0.tar.gz
Windows Binary interactiveDisplay_1.41.0.zip
macOS Binary (x86_64) interactiveDisplay_1.41.0.tgz
macOS Binary (arm64) interactiveDisplay_1.41.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/interactiveDisplay
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/interactiveDisplay
Bioc Package Browser https://code.bioconductor.org/browse/interactiveDisplay/
Package Short Url https://bioconductor.org/packages/interactiveDisplay/
Package Downloads Report Download Stats