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Rcollectl

This is the development version of Rcollectl; for the stable release version, see Rcollectl.

Help use collectl with R in Linux, to measure resource consumption in R processes


Bioconductor version: Development (3.19)

Provide functions to obtain instrumentation data on processes in a unix environment. Parse output of a collectl run. Vizualize aspects of system usage over time, with annotation.

Author: Vincent Carey [aut, cre] , Yubo Cheng [aut]

Maintainer: Vincent Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("Rcollectl")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("Rcollectl")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Rcollectl")
Rcollectl HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews Infrastructure, Software
Version 1.3.0
In Bioconductor since BioC 3.17 (R-4.3) (1 year)
License Artistic-2.0
Depends
Imports utils, ggplot2, lubridate, processx
System Requirements collectl
URL https://github.com/vjcitn/Rcollectl
Bug Reports https://support.bioconductor.org/t/Rcollectl
See More
Suggests knitr, BiocStyle, knitcitations, sessioninfo, rmarkdown, testthat, covr
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Rcollectl_1.3.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/Rcollectl
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Rcollectl
Bioc Package Browser https://code.bioconductor.org/browse/Rcollectl/
Package Short Url https://bioconductor.org/packages/Rcollectl/
Package Downloads Report Download Stats