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Recent Commits

Last 10 commit to Bioconductor release:

UPDhmm	2026-11-09 13:55:12 +0000
bedbaser	2026-11-07 16:28:50 -0500
TFutils	2026-11-06 08:29:08 -0500
biomaRt	2026-11-06 09:36:18 +0100
OmnipathR	2026-11-06 00:08:22 +0000
QRscore	2026-11-05 21:39:11 +0000
STRINGdb	2026-11-04 14:32:02 +0100
RbowtieCuda	2026-11-03 14:48:44 +0100
ChIPseeker	2026-11-03 11:13:04 +0800
MungeSumstats	2026-11-02 08:40:08 -0500

Last 10 commit to Bioconductor devel:

structToolbox	2026-11-14 21:49:14 +0000
LEA	2026-11-14 17:49:46 +0100
GExPipe	2026-11-14 21:10:41 +0500
msPurity	2026-11-14 15:06:36 +0000
limma	2026-11-14 20:00:37 +1100
edgeR	2026-11-14 19:39:23 +1100
PostChicago	2026-11-14 01:39:40 +0100
BiocCheck	2026-11-13 17:01:31 -0500
GDSAnnotator	2026-11-13 15:38:31 -0600
MetaboAnnotatoR	2026-11-13 20:58:54 +0000

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Newest Packages

Software Packages

cellchatr	.
CanvasXpressBio	CanvasXpress Visualizations for Bioconductor Data Structures
IntegratedLearner	Integrated Multi-Omics Learning for Survival and Other Outcomes
apbCatalogR	Look Up APB Result Fields by Meaning
NADIA	Missing Value-Aware Differential Abundance Analysis of DIA Proteomics Data
mgcca	Generalized Canonical Correlation Analysis with Missing Individuals
ECLIPSE	Enhanced CLonotypic Inference via Prediction of Single-cell Expression
HTAN	Query and Retrieve Human Tumor Atlas Network (HTAN) Open-Access Data
PscanR	Motif Enrichment Analysis of Regulatory DNA Sequences
RPBC	Region-Preserving Batch Correction for Paired Region-Resolved Single-Cell Data

Experiment Data Packages

PscanRBackgrounds	Precomputed Promoter Backgrounds for PscanR
GSE142512	450K and EPIC Methylation ExperimentHub Data from GEO
SpaMTPData	Experiment Data Resources for SpaMTP Workflows
AnnotatedBCGEData	100+ Curated Breast Cancer Gene Expression Data sets
HuMMANet	Curated Paired Human Microbiome-Metabolome Study Data
DaparToolshedData	Data accompanying the DaparToolshed and Prostar 2 packages
GSE280465	EPICv2 Methylation ExperimentHub Data from GEO
curatedBreastData	Curated breast cancer gene expression data with survival and treatment information
CLAMPData	Experiment data for CLAMP package
HumanRetinaLRSData	Long-read RNA-seq gene count data from human retinal organoids

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Single Package Builder

All Current Submissions

Recent Submissions

SACAT

exploreDE

repli

CPTACdata

bgnormR

spiDE

thanatome

tn5bias

spliceTerrain

R4AOP

IsoNetAnalyzeR

bigWig

RGenEDA

fuzzyCell

MacrophageFramework

MsBackendTimsTof: add support for Bruker TimsTOF MS data files to the Spectra package

splitTypeR

OncoSeq

SegStability

conformeR

Recent Builds

AnnotationGx	2026-11-12T10:33:56
gutenTAG	2026-11-12T10:18:16
AnnotationGx	2026-11-09T07:31:43
gutenTAG	2026-11-06T13:46:02
JASPAR	2026-11-04T09:55:17
JASPAR	2026-11-04T09:33:01
CycleMix	2026-10-27T17:34:01
CycleMix	2026-10-27T13:39:36
JASPAR	2026-10-14T13:50:27
enrichmet	2026-10-14T09:10:25
ctdR	2026-09-25T08:00:01
GXwasR	2026-09-22T10:53:30
enrichmet	2026-09-19T01:24:38
enrichmet	2026-09-18T23:50:30
enrichmet	2026-09-18T22:14:23
enrichmet	2026-09-18T21:53:44
enrichmet	2026-09-18T21:43:00
GXwasR	2026-09-18T21:25:29
enrichmet	2026-09-18T21:05:05
GXwasR	2026-09-18T20:50:30

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Mirror Status

Last updated 2026-11-14T06:05:05-05:00. (Will be updated every 24 hours).

To use a Bioconductor mirror use the R function `chooseBioCmirror()`

URL	Mirror	Release	Devel
https://bioconductor.org/	yes	yes	yes
https://bioconductor.posit.co/	yes	yes	yes
https://bioconductor.statistik.tu-dortmund.de/	yes	yes	yes
https://ftp.gwdg.de/pub/misc/bioconductor/	yes	yes	yes
https://bioconductor.riken.jp/	yes	yes	yes
https://free.nchc.org.tw/bioconductor/	yes	no	no
https://mirrors.tuna.tsinghua.edu.cn/bioconductor/	yes	yes	yes
https://mirrors.nju.edu.cn/bioconductor/	yes	yes	yes
https://mirrors.ustc.edu.cn/bioc/	yes	yes	yes
https://mirrors.westlake.edu.cn/bioconductor	yes	yes	no
https://mirrors.zju.edu.cn/bioconductor	yes	yes	yes
https://bioconductor.uib.no/	yes	yes	no
https://bioconductor.unipi.it	yes	no	no
https://cran.asia	yes	yes	yes
https://mirror.aarnet.edu.au/pub/bioconductor	yes	no	no
https://mirrors.dotsrc.org/bioconductor/	yes	yes	yes
https://mirror.accum.se/mirror/bioconductor.org/	yes	yes	yes

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