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SIM

This is the development version of SIM; for the stable release version, see SIM.

Integrated Analysis on two human genomic datasets


Bioconductor version: Development (3.19)

Finds associations between two human genomic datasets.

Author: Renee X. de Menezes and Judith M. Boer

Maintainer: Renee X. de Menezes <r.menezes at nki.nl>

Citation (from within R, enter citation("SIM")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("SIM")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SIM")
SIM vignette PDF R Script
Reference Manual PDF

Details

biocViews Microarray, Software, Visualization
Version 1.73.0
In Bioconductor since BioC 2.3 (R-2.8) (15.5 years)
License GPL (>= 2)
Depends R (>= 3.5), quantreg
Imports graphics, stats, globaltest, quantsmooth
System Requirements
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Suggests biomaRt, RColorBrewer
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package SIM_1.73.0.tar.gz
Windows Binary SIM_1.73.0.zip
macOS Binary (x86_64) SIM_1.73.0.tgz
macOS Binary (arm64) SIM_1.73.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/SIM
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/SIM
Bioc Package Browser https://code.bioconductor.org/browse/SIM/
Package Short Url https://bioconductor.org/packages/SIM/
Package Downloads Report Download Stats