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SNPediaR

This is the development version of SNPediaR; for the stable release version, see SNPediaR.

Query data from SNPedia


Bioconductor version: Development (3.19)

SNPediaR provides some tools for downloading and parsing data from the SNPedia web site . The implemented functions allow users to import the wiki text available in SNPedia pages and to extract the most relevant information out of them. If some information in the downloaded pages is not automatically processed by the library functions, users can easily implement their own parsers to access it in an efficient way.

Author: David Montaner [aut, cre]

Maintainer: David Montaner <david.montaner at gmail.com>

Citation (from within R, enter citation("SNPediaR")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("SNPediaR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SNPediaR")
SNPediaR HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews SNP, Software, VariantAnnotation
Version 1.29.0
In Bioconductor since BioC 3.4 (R-3.3) (7.5 years)
License GPL-2
Depends R (>= 3.0.0)
Imports RCurl, jsonlite
System Requirements
URL https://github.com/genometra/SNPediaR
Bug Reports https://github.com/genometra/SNPediaR/issues
See More
Suggests BiocStyle, knitr, rmarkdown, testthat
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package SNPediaR_1.29.0.tar.gz
Windows Binary
macOS Binary (x86_64) SNPediaR_1.29.0.tgz
macOS Binary (arm64) SNPediaR_1.29.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/SNPediaR
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/SNPediaR
Bioc Package Browser https://code.bioconductor.org/browse/SNPediaR/
Package Short Url https://bioconductor.org/packages/SNPediaR/
Package Downloads Report Download Stats