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bgx

This is the development version of bgx; for the stable release version, see bgx.

Bayesian Gene eXpression


Bioconductor version: Development (3.19)

Bayesian integrated analysis of Affymetrix GeneChips

Author: Ernest Turro, Graeme Ambler, Anne-Mette K Hein

Maintainer: Ernest Turro <et341 at cam.ac.uk>

Citation (from within R, enter citation("bgx")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("bgx")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("bgx")
HowTo BGX PDF R Script
Reference Manual PDF

Details

biocViews DifferentialExpression, Microarray, Software
Version 1.69.3
In Bioconductor since BioC 2.0 (R-2.5) (17 years)
License GPL-2
Depends R (>= 2.0.1), Biobase, affy(>= 1.5.0), gcrma(>= 2.4.1)
Imports Rcpp (>= 0.11.0)
System Requirements
URL
See More
Suggests affydata, hgu95av2cdf
Linking To Rcpp
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package bgx_1.69.3.tar.gz
Windows Binary bgx_1.69.3.zip
macOS Binary (x86_64) bgx_1.69.3.tgz
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/bgx
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/bgx
Bioc Package Browser https://code.bioconductor.org/browse/bgx/
Package Short Url https://bioconductor.org/packages/bgx/
Package Downloads Report Download Stats