EPICv2manifest

This is the development version of EPICv2manifest; for the stable release version, see EPICv2manifest.

Illumina Infinium MethylationEPIC v2.0 extended manifest from Peters et al. 2024


Bioconductor version: Development (3.20)

A data.frame containing an extended probe manifest for the Illumina Infinium Methylation v2.0 Kit. Contains the complete manifest from the Illumina-provided EPIC-8v2-0_EA.csv, plus additional probewise information described in Peters et al. (2024).

Author: Tim Peters [aut, cre], Ruth Pidsley [ctb]

Maintainer: Tim Peters <t.peters at garvan.org.au>

Citation (from within R, enter citation("EPICv2manifest")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("EPICv2manifest")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("EPICv2manifest")
The EPICv2manifest package user's guide HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews AnnotationData, AnnotationHub, Homo_sapiens, IlluminaChip, probe
Version 0.99.7
License Artistic-2.0
Depends R (>= 4.3.0)
Imports AnnotationHub
System Requirements
URL
Bug Reports https://support.bioconductor.org/t/EPICv2manifest
See More
Suggests AnnotationHubData, knitr
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me DMRcate
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package EPICv2manifest_0.99.7.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Package Short Url https://bioconductor.org/packages/EPICv2manifest/
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