Welcome to the new bioconductor.org!

JASPAR2018

This is the development version of JASPAR2018; for the stable release version, see JASPAR2018.

Data package for JASPAR 2018


Bioconductor version: Development (3.19)

Data package for JASPAR 2018. To search this databases, please use the package TFBSTools (>= 1.15.6).

Author: Ge Tan <ge_tan at live.com>

Maintainer: Ge Tan <ge_tan at live.com>

Citation (from within R, enter citation("JASPAR2018")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("JASPAR2018")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF
NEWS Text

Details

biocViews AnnotationData, FunctionalAnnotation
Version 1.1.1
License GPL-2
Depends R (>= 3.4.0), methods
Imports
System Requirements
URL http://jaspar.genereg.net/
See More
Suggests TFBSTools(>= 1.15.6)
Linking To
Enhances
Depends On Me
Imports Me enrichTF, esATAC, primirTSS
Suggests Me MAGAR, pageRank, TFBSTools
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package JASPAR2018_1.1.1.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Package Short Url https://bioconductor.org/packages/JASPAR2018/
Package Downloads Report Download Stats