TxDb.Hsapiens.UCSC.hg38.knownGene
This is the development version of TxDb.Hsapiens.UCSC.hg38.knownGene; for the stable release version, see TxDb.Hsapiens.UCSC.hg38.knownGene.
Annotation package for TxDb object(s)
Bioconductor version: Development (3.20)
Exposes an annotation databases generated from UCSC by exposing these as TxDb objects
Author: Bioconductor Core Team, Bioconductor Package Maintainer <maintainer at bioconductor.org> [cre]
Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>
Citation (from within R, enter
citation("TxDb.Hsapiens.UCSC.hg38.knownGene")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("TxDb.Hsapiens.UCSC.hg38.knownGene")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
Reference Manual |
Details
biocViews | AnnotationData, Genetics, Homo_sapiens, TxDb |
Version | 3.20.0 |
License | Artistic-2.0 |
Depends | GenomicFeatures |
Imports | AnnotationDbi |
System Requirements | |
URL |
See More
Suggests | |
Linking To | |
Enhances | |
Depends On Me | annotation |
Imports Me | DNAfusion, DegCre, OutSplice, epimutacions, musicatk, nearBynding, rGREAT, signifinder, strandCheckR, uncoverappLib, cinaR, driveR |
Suggests Me | BSgenome, BUSpaRse, ChIPpeakAnno, EpiTxDb, GRaNIE, GenVisR, GenomicDataCommons, GenomicFeatures, GenomicRanges, GenomicScores, NanoMethViz, Organism.dplyr, SARC, SOMNiBUS, Ularcirc, annotatr, bambu, enhancerHomologSearch, gDNAx, geneAttribution, hicVennDiagram, ideal, mosdef, podkat, raer, scmeth, spatzie, wiggleplotr, chipenrich.data, xcoredata |
Links To Me |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | TxDb.Hsapiens.UCSC.hg38.knownGene_3.20.0.tar.gz |
Windows Binary | |
macOS Binary (x86_64) | |
macOS Binary (arm64) | |
Package Short Url | https://bioconductor.org/packages/TxDb.Hsapiens.UCSC.hg38.knownGene/ |
Package Downloads Report | Download Stats |