Welcome to the new bioconductor.org!

UCSCRepeatMasker

This is the development version of UCSCRepeatMasker; for the stable release version, see UCSCRepeatMasker.

UCSC RepeatMasker AnnotationHub resource metadata


Bioconductor version: Development (3.19)

Store UCSC RepeatMasker AnnotationHub resource metadata. Provide provenance and citation information for UCSC RepeatMasker AnnotationHub resources. Illustrate in a vignette how to access those resources.

Author: Robert Castelo [aut, cre], Beatriz Calvo [ctb]

Maintainer: Robert Castelo <robert.castelo at upf.edu>

Citation (from within R, enter citation("UCSCRepeatMasker")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("UCSCRepeatMasker")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("UCSCRepeatMasker")
UCSC RepeatMasker AnnotationHub Resource Metadata HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews AnnotationData, AnnotationHub
Version 3.15.2
License Artistic-2.0
Depends AnnotationHub, GenomeInfoDb
Imports XML, RCurl
System Requirements
URL
See More
Suggests knitr, rmarkdown, BiocStyle
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package UCSCRepeatMasker_3.15.2.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Package Short Url https://bioconductor.org/packages/UCSCRepeatMasker/
Package Downloads Report Download Stats