grasp2db
This is the development version of grasp2db; for the stable release version, see grasp2db.
grasp2db, sqlite wrap of GRASP 2.0
Bioconductor version: Development (3.20)
grasp2db, sqlite wrap of NHLBI GRASP 2.0, an extended GWAS catalog.
Author: VJ Carey <stvjc at channing.harvard.edu>
Maintainer: VJ Carey <stvjc at channing.harvard.edu>
Citation (from within R, enter
citation("grasp2db")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("grasp2db")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("grasp2db")
grasp2db: interface to a high density GWAS catalogue | R Script | |
Notes on Bioconductor's GRASP2 database curation | HTML | R Script |
Reference Manual | ||
README | Text | |
LICENSE | Text |
Details
biocViews | AnnotationData |
Version | 1.1.0 |
License | Artistic-2.0 + file LICENSE |
Depends | RSQLite, dplyr, dbplyr |
Imports | methods, utils, stats, GenomeInfoDb, AnnotationHub, digest |
System Requirements | |
URL |
See More
Suggests | gwascat, knitr |
Linking To | |
Enhances | AnnotationHubData |
Depends On Me | |
Imports Me | |
Suggests Me | AnnotationHubData |
Links To Me |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | grasp2db_1.1.0.tar.gz |
Windows Binary | |
macOS Binary (x86_64) | |
macOS Binary (arm64) | |
Package Short Url | https://bioconductor.org/packages/grasp2db/ |
Package Downloads Report | Download Stats |