HarmonizedTCGAData
This is the development version of HarmonizedTCGAData; for the stable release version, see HarmonizedTCGAData.
Processed Harmonized TCGA Data of Five Selected Cancer Types
Bioconductor version: Development (3.20)
This package contains the processed harmonized TCGA data of five cancer types used in "Tianle Ma and Aidong Zhang, Integrate Multi-omic Data Using Affinity Network Fusion (ANF) for Cancer Patient Clustering".
Author: Tianle Ma
Maintainer: Tianle Ma <tianlema at buffalo.edu>
citation("HarmonizedTCGAData")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("HarmonizedTCGAData")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("HarmonizedTCGAData")
Patient Affinity Matrices Derived from Harmonized TCGA Dataset | HTML | R Script |
Reference Manual | ||
NEWS | Text |
Details
biocViews | CancerData, ExperimentData, ReproducibleResearch |
Version | 1.27.0 |
License | GPL-3 |
Depends | R (>= 3.4.0) |
Imports | ExperimentHub |
System Requirements | |
URL |
See More
Suggests | AnnotationHub, knitr, rmarkdown, igraph, survival, ANF, stats, testthat |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | HarmonizedTCGAData_1.27.0.tar.gz |
Windows Binary | |
macOS Binary (x86_64) | |
macOS Binary (arm64) | |
Source Repository | git clone https://git.bioconductor.org/packages/HarmonizedTCGAData |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/HarmonizedTCGAData |
Package Short Url | https://bioconductor.org/packages/HarmonizedTCGAData/ |
Package Downloads Report | Download Stats |