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MEDIPSData

This is the development version of MEDIPSData; for the stable release version, see MEDIPSData.

Example data for MEDIPS and QSEA packages


Bioconductor version: Development (3.20)

Example data for MEDIPS and QSEA packages, consisting of chromosome 22 MeDIP and control/Input sample data. Additionally, the package contains MeDIP seq data from 3 NSCLC samples and adjacent normal tissue (chr 20-22). All data has been aligned to human genome hg19.

Author: Lukas Chavez

Maintainer: Lukas Chavez <lchavez at liai.org>

Citation (from within R, enter citation("MEDIPSData")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("MEDIPSData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews ExperimentData, Genome, SequencingData
Version 1.41.0
License GPL (>= 2)
Depends R (>= 3.5.0)
Imports
System Requirements
URL
See More
Suggests
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me MEDIPS, qsea
Links To Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MEDIPSData_1.41.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/MEDIPSData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/MEDIPSData
Package Short Url https://bioconductor.org/packages/MEDIPSData/
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