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NetActivityData

This is the development version of NetActivityData; for the stable release version, see NetActivityData.

Data required for getting the gene set scores with NetActivity package


Bioconductor version: Development (3.19)

This package contains the weights from pre-trained shallow sparsely-connected autoencoders. This data is required for getting the gene set scores with NetActivity package.

Author: Carlos Ruiz-Arenas [aut, cre]

Maintainer: Carlos Ruiz-Arenas <carlos.ruiza at upf.edu>

Citation (from within R, enter citation("NetActivityData")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("NetActivityData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("NetActivityData")
NetActivityData HTML R Script
Reference Manual PDF
NEWS Text
LICENSE Text

Details

biocViews ExperimentData, RepositoryData
Version 1.5.0
License MIT + file LICENSE
Depends R (>= 4.2.0)
Imports
System Requirements
URL
See More
Suggests BiocStyle, knitr
Linking To
Enhances
Depends On Me
Imports Me NetActivity
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package NetActivityData_1.5.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/NetActivityData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/NetActivityData
Package Short Url https://bioconductor.org/packages/NetActivityData/
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