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WES.1KG.WUGSC

This is the development version of WES.1KG.WUGSC; for the stable release version, see WES.1KG.WUGSC.

Whole Exome Sequencing (WES) of chromosome 22 401st to 500th exon from the 1000 Genomes (1KG) Project by the Washington University Genome Sequencing Center (WUGSC).


Bioconductor version: Development (3.19)

The assembled .bam files of whole exome sequencing data from the 1000 Genomes Project. 46 samples sequenced by the Washington University Genome Sequencing Center are included.

Author: Yuchao Jiang, Nancy R. Zhang

Maintainer: Yuchao Jiang <yuchaoj at wharton.upenn.edu>

Citation (from within R, enter citation("WES.1KG.WUGSC")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("WES.1KG.WUGSC")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("WES.1KG.WUGSC")
Using CODEX PDF
Reference Manual PDF
NEWS Text

Details

biocViews DNASeqData, ExperimentData, Homo_sapiens_Data, Project1000genomes, SequencingData
Version 1.35.0
License GPL-2
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Depends On Me
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Suggests Me CODEX, iCNV
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package WES.1KG.WUGSC_1.35.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/WES.1KG.WUGSC
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/WES.1KG.WUGSC
Package Short Url https://bioconductor.org/packages/WES.1KG.WUGSC/
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