Welcome to the new bioconductor.org!

genomationData

This is the development version of genomationData; for the stable release version, see genomationData.

Experimental data for showing functionalities of the genomation package


Bioconductor version: Development (3.19)

The package contains Chip Seq, Methylation and Cage data, downloaded from Encode

Author: Altuna Akalin, Vedran Franke

Maintainer: Vedran Franke <vedran.franke at gmail.com>

Citation (from within R, enter citation("genomationData")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("genomationData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("genomationData")
genomationData PDF R Script
Reference Manual PDF

Details

biocViews ChIPSeqData, ChipOnChipData, ENCODE, ExperimentData, Genome, SequencingData, StemCell
Version 1.35.0
License GPL-3
Depends
Imports
System Requirements
URL
See More
Suggests knitr
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me genomation
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package genomationData_1.35.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/genomationData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/genomationData
Package Short Url https://bioconductor.org/packages/genomationData/
Package Downloads Report Download Stats