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microRNAome

This is the development version of microRNAome; for the stable release version, see microRNAome.

SummarizedExperiment for the microRNAome project


Bioconductor version: Development (3.20)

This package provides a SummarizedExperiment object of read counts for microRNAs across tissues, cell-types, and cancer cell-lines. The read count matrix was prepared and provided by the author of the study: Towards the human cellular microRNAome.

Author: Matthew N. McCall <mccallm at gmail.com>, Marc K. Halushka <mhalush1 at jhmi.edu>, Arun H. Patil <arun26feb at gmail.com>

Maintainer: Matthew N. McCall <mccallm at gmail.com>

Citation (from within R, enter citation("microRNAome")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("microRNAome")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF
NEWS Text

Details

biocViews CancerData, CellCulture, ExperimentData, RNASeqData, SequencingData, miRNAData
Version 1.27.0
License GPL (>= 2)
Depends R (>= 3.5.0), SummarizedExperiment
Imports
System Requirements
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Suggests BiocGenerics, RUnit
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Depends On Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package microRNAome_1.27.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/microRNAome
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/microRNAome
Package Short Url https://bioconductor.org/packages/microRNAome/
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