Welcome to the new bioconductor.org!

BEAT

BEAT - BS-Seq Epimutation Analysis Toolkit


Bioconductor version: Release (3.18)

Model-based analysis of single-cell methylation data

Author: Kemal Akman <akman at mpipz.mpg.de>

Maintainer: Kemal Akman <akman at mpipz.mpg.de>

Citation (from within R, enter citation("BEAT")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BEAT")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BEAT")
Analysing single-cell BS-Seq data with the "BEAT" package PDF R Script
Reference Manual PDF

Details

biocViews DNAMethylation, Epigenetics, Genetics, ImmunoOncology, MethylSeq, Software
Version 1.40.0
In Bioconductor since BioC 2.14 (R-3.1) (10 years)
License LGPL (>= 3.0)
Depends R (>= 2.13.0)
Imports GenomicRanges, ShortRead, Biostrings, BSgenome
System Requirements
URL
See More
Suggests
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BEAT_1.40.0.tar.gz
Windows Binary BEAT_1.40.0.zip
macOS Binary (x86_64) BEAT_1.40.0.tgz
macOS Binary (arm64) BEAT_1.40.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/BEAT
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/BEAT
Bioc Package Browser https://code.bioconductor.org/browse/BEAT/
Package Short Url https://bioconductor.org/packages/BEAT/
Package Downloads Report Download Stats