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FamAgg

Pedigree Analysis and Familial Aggregation


Bioconductor version: Release (3.18)

Framework providing basic pedigree analysis and plotting utilities as well as a variety of methods to evaluate familial aggregation of traits in large pedigrees.

Author: J. Rainer, D. Taliun, C.X. Weichenberger

Maintainer: Johannes Rainer <johannes.rainer at eurac.edu>

Citation (from within R, enter citation("FamAgg")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("FamAgg")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("FamAgg")
Pedigree Analysis and Familial Aggregation HTML R Script
Reference Manual PDF
NEWS Text
LICENSE Text

Details

biocViews Genetics, Software
Version 1.30.0
In Bioconductor since BioC 3.3 (R-3.3) (8 years)
License MIT + file LICENSE
Depends methods, kinship2, igraph
Imports gap (>= 1.1-17), Matrix, BiocGenerics, utils, survey
System Requirements
URL https://github.com/EuracBiomedicalResearch/FamAgg
Bug Reports https://github.com/EuracBiomedicalResearch/FamAgg/issues
See More
Suggests BiocStyle, knitr, RUnit, rmarkdown
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package FamAgg_1.30.0.tar.gz
Windows Binary FamAgg_1.30.0.zip
macOS Binary (x86_64) FamAgg_1.30.0.tgz
macOS Binary (arm64) FamAgg_1.30.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/FamAgg
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/FamAgg
Bioc Package Browser https://code.bioconductor.org/browse/FamAgg/
Package Short Url https://bioconductor.org/packages/FamAgg/
Package Downloads Report Download Stats