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FoldGO

Package for Fold-specific GO Terms Recognition


Bioconductor version: Release (3.18)

FoldGO is a package designed to annotate gene sets derived from expression experiments and identify fold-change-specific GO terms.

Author: Daniil Wiebe <daniil.wiebe at gmail.com> [aut, cre]

Maintainer: Daniil Wiebe <daniil.wiebe at gmail.com>

Citation (from within R, enter citation("FoldGO")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("FoldGO")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews DifferentialExpression, GO, GeneExpression, Software
Version 1.20.0
In Bioconductor since BioC 3.8 (R-3.5) (5.5 years)
License GPL-3
Depends R (>= 4.0)
Imports topGO(>= 2.30.1), ggplot2 (>= 2.2.1), tidyr (>= 0.8.0), stats, methods
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary FoldGO_1.20.0.zip
macOS Binary (x86_64) FoldGO_1.20.0.tgz
macOS Binary (arm64) FoldGO_1.20.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/FoldGO
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/FoldGO
Bioc Package Browser https://code.bioconductor.org/browse/FoldGO/
Package Short Url https://bioconductor.org/packages/FoldGO/
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