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MBCB

MBCB (Model-based Background Correction for Beadarray)


Bioconductor version: Release (3.18)

This package provides a model-based background correction method, which incorporates the negative control beads to pre-process Illumina BeadArray data.

Author: Yang Xie <Yang.Xie at UTSouthwestern.edu>

Maintainer: Jeff Allen <Jeffrey.Allen at UTSouthwestern.edu>

Citation (from within R, enter citation("MBCB")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MBCB")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MBCB")
MBCB PDF R Script
Reference Manual PDF

Details

biocViews Microarray, Preprocessing, Software
Version 1.56.0
In Bioconductor since BioC 2.7 (R-2.12) (13.5 years)
License GPL (>= 2)
Depends R (>= 2.9.0), tcltk, tcltk2
Imports preprocessCore, stats, utils
System Requirements
URL http://www.utsouthwestern.edu
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MBCB_1.56.0.tar.gz
Windows Binary MBCB_1.56.0.zip
macOS Binary (x86_64) MBCB_1.56.0.tgz
macOS Binary (arm64) MBCB_1.56.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/MBCB
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/MBCB
Bioc Package Browser https://code.bioconductor.org/browse/MBCB/
Package Short Url https://bioconductor.org/packages/MBCB/
Package Downloads Report Download Stats