MBQN
Mean/Median-balanced quantile normalization
Bioconductor version: Release (3.19)
Modified quantile normalization for omics or other matrix-like data distorted in location and scale.
Author: Eva Brombacher [aut, cre] , Clemens Kreutz [aut, ctb] , Ariane Schad [aut, ctb]
Maintainer: Eva Brombacher <brombach at imbi.uni-freiburg.de>
Citation (from within R, enter
citation("MBQN")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("MBQN")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("MBQN")
MBQN Package | HTML | R Script |
Reference Manual | ||
NEWS | Text | |
LICENSE | Text |
Details
biocViews | Normalization, Preprocessing, Proteomics, Software |
Version | 2.16.0 |
In Bioconductor since | BioC 3.10 (R-3.6) (5 years) |
License | GPL-3 + file LICENSE |
Depends | R (>= 3.6) |
Imports | stats, graphics, utils, limma(>= 3.30.13), SummarizedExperiment(>= 1.10.0), preprocessCore(>= 1.36.0), BiocFileCache, rappdirs, xml2, RCurl, ggplot2, PairedData, rmarkdown |
System Requirements | |
URL | https://github.com/arianeschad/mbqn |
Bug Reports | https://github.com/arianeschad/MBQN/issues |
See More
Suggests | knitr |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | MBQN_2.16.0.tar.gz |
Windows Binary | MBQN_2.16.0.zip (64-bit only) |
macOS Binary (x86_64) | MBQN_2.16.0.tgz |
macOS Binary (arm64) | MBQN_2.16.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/MBQN |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/MBQN |
Bioc Package Browser | https://code.bioconductor.org/browse/MBQN/ |
Package Short Url | https://bioconductor.org/packages/MBQN/ |
Package Downloads Report | Download Stats |