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MSstatsQCgui

A graphical user interface for MSstatsQC package


Bioconductor version: Release (3.18)

MSstatsQCgui is a Shiny app which provides longitudinal system suitability monitoring and quality control tools for proteomic experiments.

Author: Eralp Dogu [aut, cre], Sara Taheri [aut], Olga Vitek [aut]

Maintainer: Eralp Dogu <eralp.dogu at gmail.com>

Citation (from within R, enter citation("MSstatsQCgui")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MSstatsQCgui")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MSstatsQCgui")
MSstatsQCgui HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews GUI, MassSpectrometry, Proteomics, QualityControl, Software
Version 1.22.0
In Bioconductor since BioC 3.7 (R-3.5) (6 years)
License Artistic License 2.0
Depends
Imports shiny, MSstatsQC, ggExtra, gridExtra, plotly, dplyr, grid
System Requirements
URL http://msstats.org/msstatsqc
Bug Reports https://groups.google.com/forum/#!forum/msstatsqc
See More
Suggests knitr
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MSstatsQCgui_1.22.0.tar.gz
Windows Binary MSstatsQCgui_1.22.0.zip
macOS Binary (x86_64) MSstatsQCgui_1.22.0.tgz
macOS Binary (arm64) MSstatsQCgui_1.22.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/MSstatsQCgui
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/MSstatsQCgui
Bioc Package Browser https://code.bioconductor.org/browse/MSstatsQCgui/
Package Short Url https://bioconductor.org/packages/MSstatsQCgui/
Package Downloads Report Download Stats