Welcome to the new bioconductor.org!

MiChip

MiChip Parsing and Summarizing Functions


Bioconductor version: Release (3.18)

This package takes the MiChip miRNA microarray .grp scanner output files and parses these out, providing summary and plotting functions to analyse MiChip hybridizations. A set of hybridizations is packaged into an ExpressionSet allowing it to be used by other BioConductor packages.

Author: Jonathon Blake <blake at embl.de>

Maintainer: Jonathon Blake <blake at embl.de>

Citation (from within R, enter citation("MiChip")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MiChip")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MiChip")
MiChip miRNA Microarray Processing PDF R Script
Reference Manual PDF

Details

biocViews Microarray, Preprocessing, Software
Version 1.56.0
In Bioconductor since BioC 2.5 (R-2.10) (14.5 years)
License GPL (>= 2)
Depends R (>= 2.3.0), Biobase
Imports Biobase
System Requirements
URL
See More
Suggests
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MiChip_1.56.0.tar.gz
Windows Binary MiChip_1.56.0.zip
macOS Binary (x86_64) MiChip_1.56.0.tgz
macOS Binary (arm64) MiChip_1.56.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/MiChip
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/MiChip
Bioc Package Browser https://code.bioconductor.org/browse/MiChip/
Package Short Url https://bioconductor.org/packages/MiChip/
Package Downloads Report Download Stats